PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0153s0032.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 243aa    MW: 26787.9 Da    PI: 5.4108
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0153s0032.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2552e-1773123255
                  AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                           y+GVr ++ +g+++AeIrd + ng   r++lg+f++ae Aa a+++a+ +++g
  Kalax.0153s0032.1.p  73 SYRGVRSRP-WGKFAAEIRDSTRNG--IRVWLGTFDSAEAAALAYDQAAFAMRG 123
                          69****999.**********44465..*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003801.4E-3573137IPR001471AP2/ERF domain
PROSITE profilePS5103222.60373131IPR001471AP2/ERF domain
SuperFamilySSF541711.5E-2173132IPR016177DNA-binding domain
PfamPF008473.8E-1273123IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.0E-2973132IPR001471AP2/ERF domain
CDDcd000188.93E-2074133No hitNo description
PRINTSPR003671.1E-97485IPR001471AP2/ERF domain
PRINTSPR003671.1E-997113IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    Send to blast
MDFCPQSSSS FSWEDPFHSS LPFNVNDSQE MLLWDMLSSS PATTTSSSEE LQPVQTQDER  60
EVDSAKAAKK SKSYRGVRSR PWGKFAAEIR DSTRNGIRVW LGTFDSAEAA ALAYDQAAFA  120
MRGSAAVLNF PAATVMDSMK GMAVRCEEGC SPVLELKKKH LLRRKSSTMP RKAAKQIGEE  180
NCEGLSRQWK CERNNVVVFE DLGAEYLEEL LLVSSSSSSA SYHQQQHSPS PTEGVADASF  240
FF*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A3e-2770131263ATERF1
3gcc_A3e-2770131263ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010093429.15e-68Ethylene-responsive transcription factor 1B
SwissprotQ8LDC81e-61ERF92_ARATH; Ethylene-responsive transcription factor 1B
TrEMBLD8VD372e-72D8VD37_ACTDE; Ethylene response factor 10
STRINGSolyc09g066360.1.12e-64(Solanum lycopersicum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.11e-40ethylene response factor 1